SNP Profiles matching U 45 [PER]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	AA	GG	TT	GG	CC	CG	GG	CT	AG	GG	AA	GG
1._GU_221_/H	_	_	AC	GG	TT	_	CC	CG	GG	TT	_	_	AA	GG
2._GC-01-074-4-10	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
3._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
4._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
5._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
6._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
7._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
8._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
9._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
10._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
11._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
12._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
13._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
14._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
15._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	AA	GG
16._GC-03-026-2-15	TT	CC	AC	GG	TT	GG	CC	CG	GG	TT	AA	GG	_	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	GG	GG	CC	CC	TT	TT	GG	AA	TT	AC	CC	GG
1._GU_221_/H	AC	CC	GG	GG	CC	_	TT	_	GG	_	_	_	CC	_
2._GC-01-074-4-10	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
3._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
4._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
5._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
6._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
7._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
8._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
9._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
10._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
11._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
12._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
13._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
14._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
15._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG
16._GC-03-026-2-15	AC	CC	GG	GG	CC	CC	TT	CT	GG	AA	TT	CC	CC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	TT	AA	CC	CC	GG	AA	TT	GT	CC	CC	CC	CC	AG	X_X
1._GU_221_/H	TT	AA	_	CC	_	_	_	GT	_	_	CC	CC	AG	X_X
2._GC-01-074-4-10	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
3._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
4._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
5._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
6._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
7._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
8._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
9._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
10._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
11._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
12._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
13._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
14._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
15._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X
16._GC-03-026-2-15	TT	AA	CC	CC	GG	AA	TT	GT	TT	CC	CC	CC	AG	X_X

Input profile: U_45_[PER] RUQ_1495

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._GU_221_/H

93.8 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 7410 ( >> 1410) 4 > FP

Dapeng Zhang, 2016

2._GU_221_/H GC-01-074-4-10

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

Mars, 2018

3._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP3

Mars, 2018

4._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

5._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP4

Mars, 2018

6._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

7._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

8._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Mars, 2018

9._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

Mars, 2018

10._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9 > FP1

Mars, 2018

11._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10 > FP2

Mars, 2018

12._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

Mars, 2018

13._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

Mars, 2018

14._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15

Mars, 2018

15._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

Mars, 2018

16._U_54_[PER] GC-03-026-2-15

90 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

Mars, 2018

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP469	15	TcSNP529
16	TcSNP534	17	TcSNP560	18	TcSNP577	19	TcSNP591	20	TcSNP602
21	TcSNP619	22	TcSNP702	23	TcSNP723	24	TcSNP731	25	TcSNP799
26	TcSNP823	27	TcSNP872	28	TcSNP878	29	TcSNP891	30	TcSNP998
31	TcSNP999	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484

SNP Profiles matching U 45 [PER]

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Input profile: U_45_[PER] RUQ_1495

1._GU_221_/H

93.8 % 24 shared markers

2._GU_221_/H GC-01-074-4-10

90.2 % 41 shared markers

3._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

4._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

5._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

6._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

7._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

8._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

9._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

10._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

11._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

12._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

13._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

14._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

15._U_54_[PER] GC-03-026-2-15

90.2 % 41 shared markers

16._U_54_[PER] GC-03-026-2-15

90 % 40 shared markers

93.8 %
24 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90.2 %
41 shared markers

90 %
40 shared markers